Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:25625 Zhadanov AB, et al., Genomic structure and chromosomal localization of the mouse LIM/homeobox gene Lhx3. Genomics. 1995 May 1;27(1):27-32
• ID
  MGI:44951

Genes

Gene	Assay Type	Description
Vim	reported elsewhere
Lhx3	Southern analysis	Lhx3 cDNA
Notch1	reported elsewhere
Sptan1	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Vim	Lhx3	Notch1	Sptan1
49	b	b	b	b
46	s	s	s	s
3	s	b	b	b
3	b	s	s	s
0	s	s	b	b
0	b	b	s	s
0	s	s	s	b
1	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Vim	Lhx3	9	62
Lhx3	Notch1	0	55
Notch1	Sptan1	0	14

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Vim	Lhx3	15	173	8.671	2.139
Lhx3	Notch1	0	157	0.000	0.000
Notch1	Sptan1	1	116	0.862	0.858