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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:22446 Pavan WJ, et al., A high-resolution linkage map of the lethal spotting locus: a mouse model for Hirschsprung disease. Mamm Genome. 1995 Jan;6(1):1-7
  • ID
    MGI:44704
Genes
GeneAlleleAssay TypeDescription
a visible phenotype
D2Mit25 PCR amplified length variant
D2Mit147 PCR amplified length variant
Pck1 Southern analysis Pck1 cDNA1
D2Mit113 PCR amplified length variant
D2Mit213 PCR amplified length variant
D2Ucl1 PCR amplified length variant
Edn3 Edn3ls SSCP Edn3-pA1, Edn3-pB1
Gnas Southern analysis Gnas cDNA2
D2Mit174 PCR amplified length variant
D2Mit148 PCR amplified length variant
D2Mit114 PCR amplified length variant
D2Mit200 PCR amplified length variant
Notes
  • Reference
    The loci mapped in this reference are ordered by a composite of 3 reported crosses. For each cross the loci are ordered as reported for the cross, and may differ from the composite. ls is an allele of Edn3.
  • Experiment
    Only ls/ls progeny typed in this cross. Only offspring showing a recombination between D2Mit25 and D2Mit200 were tested for D2Mit113, D2Mit147, D2Mit148, D2Mit174, D2Mit213, D2Ucl1, Edn3, Gnas and Pck1. Summary haplotypes include 377 offspring not typed for all lociOffspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
  • Strain
    (LS/Le x CAST/Ei)F1
  • Male Parent
    <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>/<l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>
  • Strain
    LS/LeJ
  • Allele 1
    l from LS/LeJ
  • Allele 2
    c from CAST/EiJ
CROSS Data
MC #mice a D2Mit25 D2Mit147 Pck1 D2Mit113 D2Mit213 D2Ucl1 Edn3 Gnas D2Mit174 D2Mit148 D2Mit114 D2Mit200
324 l l . . . l l l l . . . l
53 c l . . . l l l l . . . l
5 c c l l l l l l l l l l l
10 c c c l l l l l l l l l l
1 c c c c l l l l l l l l l
2 c c c c c l l l l l l l l
1 l l l l l l l l l c c c c
1 l l l l l l l l l l c c c
1 l l l l l l l l l l l c c
2 l l l l l l l l l l l l c
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory