Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  3
• Reference
  J:20819 Rothnagel JA, et al., Characterization of the mouse loricrin gene: linkage with profilaggrin and the flaky tail and soft coat mutant loci on chromosome 3. Genomics. 1994 Sep 15;23(2):450-6
• ID
  MGI:44390

Genes

Gene	Assay Type	Description
Fgg	reported elsewhere
Ntrk1	reported elsewhere
Loricrin	Southern analysis	pK1500
Flg	Southern analysis	Flg cDNA1
Gja5	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Fgg	Ntrk1	Loricrin	Flg	Gja5
66	b	b	b	b	b
53	s	s	s	s	s
0	s	b	b	b	b
1	b	s	s	s	s
1	s	s	b	b	b
2	b	b	s	s	s
2	s	s	s	b	b
0	b	b	b	s	s
3	s	s	s	s	b
0	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Fgg	Ntrk1	1	62
Ntrk1	Loricrin	1	20
Loricrin	Flg	0	3
Flg	Gja5	1	35

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Fgg	Ntrk1	2	191	1.047	0.737
Ntrk1	Loricrin	4	149	2.685	1.324
Loricrin	Flg	2	131	1.527	1.071
Flg	Gja5	4	164	2.439	1.205