Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  14
• Reference
  J:21511 Kaushik N, et al., Intracisternal A-type particle elements as genetic markers: detection by repeat element viral element amplified locus-PCR. Mamm Genome. 1994 Nov;5(11):688-95
• ID
  MGI:44359

Genes

Gene	Assay Type	Description
Rarb	reported elsewhere
Tcra	reported elsewhere
Iap3rc13	PCR amplified length variant	JS139, JS136
Iap5rb1	PCR amplified length variant	JS140, JS135
Iap5rb3	PCR amplified length variant	JS140, JS135
Iap5rb4	PCR amplified length variant	JS140, JS135
Iap5rb5	PCR amplified length variant	JS140, JS135
Iap5rb10	PCR amplified length variant	JS140, JS135
Iap5rc6	PCR amplified length variant	JS140, JS136

RI

• Origin
  C57BL/6J x C3H/HeJ
• Designation
  BXH
• Abbreviation 1
  B
• Abbreviation 2
  H

RI Data (columns show RI Lines sampled)

Marker	2	3	4	6	7	8	9	10	11	12	14	19
Iap3rc13	H	B	H	B	B	H	B	B	B	B	H	H
Iap5rb1	H	H	H	B	B	B	H	B	B	H	H	H
Iap5rb3	H	H	H	B	B	B	H	B	B	H	H	H
Iap5rb4	H	B	H	B	B	H	B	B	B	B	H	H
Iap5rb5	H	B	H	B	B	H	B	B	B	B	H	H
Iap5rb10	H	B	H	B	B	H	B	B	B	B	H	H
Iap5rc6	H	B	H	B	B	H	B	B	B	B	H	H

2x2 Data

Marker 1	Marker 2	Discordant	Strains	RI Sets
Iap3rc13	Tcra	0	12	BXH
Iap5rb1	Rarb	0	12	BXH
Iap5rb3	Rarb	0	12	BXH
Iap5rb4	Tcra	0	12	BXH
Iap5rb5	Tcra	0	12	BXH
Iap5rb10	Tcra	0	12	BXH
Iap5rc6	Tcra	0	12	BXH

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Iap3rc13	Iap5rb1	4	12	16.667	13.608
Iap5rb1	Iap5rb3	0	12	0.000	0.000
Iap5rb3	Iap5rb4	4	12	16.667	13.608
Iap5rb4	Iap5rb5	0	12	0.000	0.000
Iap5rb5	Iap5rb10	0	12	0.000	0.000
Iap5rb10	Iap5rc6	0	12	0.000	0.000