Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  X
• Reference
  J:21019 Blair PJ, et al., The mouse scurfy (sf) mutation is tightly linked to Gata1 and Tfe3 on the proximal X chromosome. Mamm Genome. 1994 Oct;5(10):652-4
• ID
  MGI:44247

Genes

Gene	Assay Type	Description
DXWas70	Southern analysis	DXWas70 probe
Gata1	Southern analysis	Gata1 cDNA2
Foxp3	visible phenotype
Otc	PCR amplified length variant	Otc-pA, Otc-pB
Timp1	Southern analysis	TIMP cDNA
DXSmh141	Southern analysis	DXSmh141 probe
Hprt1	Southern analysis	Hprt probe

Notes

• Experiment
  Only male progeny were tested.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s>
• Strain
  (M. m. musculus x M. spretus)F1-Foxp3 Otc/+ +
• Male Parent
  <c> <c> <c> <c> <c> <c> <c>/Y
• Strain
  C3H/Rl
• Allele 1
  c from M. m. musculus
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	DXWas70	Gata1	Foxp3	Otc	Timp1	DXSmh141	Hprt1
105	c	c	c	c	c	c	c
135	s	s	s	s	s	s	s
1	s	c	c	c	c	c	c
2	c	s	s	s	s	s	s
0	s	s	c	c	c	c	c
0	c	c	s	s	s	s	s
2	s	s	s	c	c	c	c
0	c	c	c	s	s	s	s
5	s	s	s	s	c	c	c
7	c	c	c	c	s	s	s
1	s	s	s	s	s	c	c
3	c	c	c	c	c	s	s
15	s	s	s	s	s	s	c
13	c	c	c	c	c	c	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
DXWas70	Gata1	3	289	1.038	0.596
Gata1	Foxp3	0	289	0.000	0.000
Foxp3	Otc	2	289	0.692	0.488
Otc	Timp1	12	289	4.152	1.174
Timp1	DXSmh141	4	289	1.384	0.687
DXSmh141	Hprt1	28	289	9.689	1.740