Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:18005 Vitaterna MH, et al., Mutagenesis and mapping of a mouse gene, Clock, essential for circadian behavior. Science. 1994 Apr 29;264(5159):719-25
• ID
  MGI:43660

Genes

Gene	Assay Type
D5Mit48	PCR amplified length variant
D5Mit66	PCR amplified length variant
D5Mit81	PCR amplified length variant
D5Mit83	PCR amplified length variant
Clock	visible phenotype
D5Mit24	PCR amplified length variant
D5Mit30	PCR amplified length variant
D5Mit101	PCR amplified length variant

Notes

• Experiment
  A subset of 20 mice from this cross was used to indicate linkage of Clock with D5Mit24 (lod > 3.0).Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  (BALB/cJ x C57BL/6J)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6J
• Allele 2
  c from BALB/cJ

CROSS Data

MC #mice	D5Mit48	D5Mit66	D5Mit81	D5Mit83	Clock	D5Mit24	D5Mit30	D5Mit101
16	b	b	b	b	b	b	b	b
20	c	c	c	c	c	c	c	c
3	b	c	c	c	c	c	c	c
4	c	b	b	b	b	b	b	b
2	c	c	b	b	b	b	b	b
3	b	b	b	c	c	c	c	c
2	c	c	c	b	b	b	b	b
4	b	b	b	b	c	c	c	c
2	c	c	c	c	b	b	b	b
2	b	b	b	b	b	c	c	c
3	c	c	c	c	c	b	b	b
3	b	b	b	b	b	b	c	c
7	c	c	c	c	c	c	b	b
5	b	b	b	b	b	b	b	c
8	c	c	c	c	c	c	c	b
1	b	c	c	c	c	b	b	b
1	c	b	b	b	b	c	c	c
3	b	c	c	c	c	c	b	b
3	b	c	c	c	c	c	c	b
1	c	b	b	b	b	b	b	c
1	b	b	c	c	c	c	b	b
1	c	c	b	b	b	b	c	c
2	b	b	c	c	c	c	c	b
1	c	c	b	b	b	b	b	c
1	c	c	c	b	b	b	c	c
1	c	c	c	b	b	b	b	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D5Mit48	D5Mit66	16	100	16.000	3.666
D5Mit66	D5Mit81	7	100	7.000	2.551
D5Mit81	D5Mit83	7	100	7.000	2.551
D5Mit83	Clock	6	100	6.000	2.375
Clock	D5Mit24	7	100	7.000	2.551
D5Mit24	D5Mit30	16	100	16.000	3.666
D5Mit30	D5Mit101	21	100	21.000	4.073