Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  4
• Reference
  J:18269 Fleming J, et al., Linkage analysis of the whirler deafness gene on mouse chromosome 4. Genomics. 1994 May 1;21(1):42-8
• ID
  MGI:43458

Genes

Gene	Allele	Assay Type	Description
Mup1		PCR amplified length variant	37.MMUPBS6
Whrn		visible phenotype
Tnc		Southern analysis	Hxb cDNA
Tyrp1	Tyrp1^b	visible phenotype
D4Wsm1		PCR amplified length variant	D4Wsm1-pA, D4Wsm1-pB

Notes

• Reference
  Authors use symbols Tzn, D4Mit27b, b, and Hxb for Zfp37, D4Mit27, Tyrp1, and Tnc respectively.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w>
• Strain
  (CBA/Ca x STOCK Whrn Tyrp1)F1
• Male Parent
  <w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w>/<w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w> <w>
• Strain
  STOCK Whrn Tyrp1
• Allele 1
  c from CBA/Ca
• Allele 2
  w from STOCK Whrn Tyrp1

CROSS Data

MC #mice	Mup1	Whrn	Tnc	Tyrp1	D4Wsm1
53	c	c	c	c	c
34	w	w	w	w	w
2	w	w	w	w	c
5	c	c	c	c	w
1	w	w	w	c	c
9	c	c	c	w	w

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Mup1	Whrn	0	104	0.000	0.000
Whrn	Tnc	0	104	0.000	0.000
Tnc	Tyrp1	10	104	9.615	2.891
Tyrp1	D4Wsm1	7	104	6.731	2.457