Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  11
• Reference
  J:17613 Markel PD, et al., Initial characterization of STS markers in the LSXSS series of recombinant inbred strains. Mamm Genome. 1994 Apr;5(4):199-202
• ID
  MGI:43186

Genes

Gene	Assay Type	Description
Il4	PCR amplified length variant	Il4-pA, Il4-pB
Csf2	PCR amplified length variant	3.MMGMCSFG
Hoxb	PCR amplified length variant	5.MMHOX23R
Myl4	PCR amplified length variant	7.MLC1A
Gfap	PCR amplified length variant	39.MMGFAPD

Notes

• Reference
  Each of the following markers, Bcl2 (Chr 1), Igh (Chr12) and Hoxb, Myla and Gfap (Chr 11), explained at least 5% of the genetic variation in sleep time among LSXSS RI strains.

RI

• Origin
  LS/Ibg x SS/Ibg
• Designation
  LSXSS
• Abbreviation 1
  L
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	12	17	18	19	20	22	23	25	26	28	30	32	33	34	36	38	40
Il4	L	L	S	S	S	L	S	L	S	S	L	S	L	S	S	S	L	L	S	S	S	S	L	S	S	S	L
Csf2	L	L	S	S	S	L	S	L	S	S	L	S	L	S	S	S	L	L	S	S	S	S	L	S	S	S	L
Hoxb	S	S	L	S	L	S	S	S	S	L	L	S	L	S	S	S	S	L	L	L	S	S	S	L	L	S	L
Myl4	S	S	L	S	L	S	S	S	S	S	L	L	L	S	S	S	S	L	L	L	S	S	S	S	L	S	L
Gfap	S	S	L	S	L	S	S	S	S	S	L	L	L	S	S	S	S	L	L	L	S	S	S	S	L	S	L

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Il4	Csf2	0	27	0.000	0.000
Csf2	Hoxb	13	27	43.333	31.156
Hoxb	Myl4	3	27	3.333	2.177
Myl4	Gfap	0	27	0.000	0.000