Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:16150 Klocke R, et al., Chromosomal mapping in the mouse of eight K(+)-channel genes representing the four Shaker-like subfamilies Shaker, Shab, Shaw, and Shal. Genomics. 1993 Dec;18(3):568-74
• ID
  MGI:42641

Genes

Gene	Assay Type	Description
Hoxa7	Southern analysis	Hoxa7 genomic 1
Raf1	Southern analysis	Raf1 cDNA1
Tpi1	Southern analysis	Tpi1 cDNA1
Kcna1	Southern analysis	RK1
Kcna5	Southern analysis	RK4
Kcna6	Southern analysis	RCK2

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J-Vps54/+ x SEG/1 +/+)F1
• Male Parent
  <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J-Vps54
• Allele 1
  b from C57BL/6J-Vps54
• Allele 2
  s from SEG/1

CROSS Data

MC #mice	Hoxa7	Raf1	Tpi1	Kcna1	Kcna5	Kcna6
27	s	s	s	s	s	s
21	b	b	b	b	b	b
10	b	s	s	s	s	s
12	s	b	b	b	b	b
2	.	s	s	s	s	s
2	.	b	b	b	b	b
5	b	b	s	s	s	s
2	s	s	b	b	b	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hoxa7	Raf1	22	77	28.571	5.148
Raf1	Tpi1	7	81	8.642	3.122
Tpi1	Kcna1	0	81	0.000	0.000
Kcna1	Kcna5	0	81	0.000	0.000
Kcna5	Kcna6	0	81	0.000	0.000