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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:16150 Klocke R, et al., Chromosomal mapping in the mouse of eight K(+)-channel genes representing the four Shaker-like subfamilies Shaker, Shab, Shaw, and Shal. Genomics. 1993 Dec;18(3):568-74
  • ID
    MGI:42639
Genes
GeneAlleleAssay TypeDescription
Chrna1 Southern analysis Acra cDNA1
Kcna4 Southern analysis RK3
Pax6 Southern analysis Pax6 cDNA1
a visible phenotype
Pck1 Southern analysis Pck1 genomic 1
Kras2-rs2 Southern analysis Kras3 cDNA1
Kcnb1 Southern analysis DRK1
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J-Vps54/+ x SEG/1 +/+)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J-Vps54
  • Allele 1
    b from C57BL/6J-Vps54
  • Allele 2
    s from SEG/1
CROSS Data
MC #mice Chrna1 Kcna4 Pax6 a Pck1 Kras2-rs2 Kcnb1
14 s s s s s s s
13 b b b b b b b
1 s s . s s s s
1 b b . b b b b
0 s s s s . s s
1 b b b b . b b
4 b s s s s s s
3 s b b b b b b
2 b s . s s s s
0 s b . b b b b
0 b . . s . s s
1 s . . b . b b
0 . s . s s s s
3 . b . b b b b
0 b b s s s s s
1 s s b b b b b
2 b b . s s s s
2 s s . b b b b
5 b b b s s s s
5 s s s b b b b
1 . b . s s s s
0 . s . b b b b
1 . . . s s s s
0 . . . b b b b
3 . . . s . s s
2 . . . b . b b
1 . . . s . . s
0 . . . b . . b
3 b b b b s s s
2 s s s s b b b
1 b b . b s s s
0 s s . s b b b
1 . . . b s s s
0 . . . s b b b
2 b b b b b s s
0 s s s s s b b
1 b b b b . s s
0 s s s s . b b
1 . . . b . s s
1 . . . s . b b
2 b b b b b b s
0 s s s s s s b
0 s b b s s s s
1 b s s b b b b
1 s b b b s s s
0 b s s s b b b
1 s s b b s s s
0 b b s s b b b
0 . s . b s s s
1 . b . s b b b
1 . s . b b b s
0 . b . s s s b
1 s s s s b b s
0 b b b b s s b
1 . . . s . b s
0 . . . b . s b
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Chrna1 Kcna4 11 69 15.942 4.407
Kcna4 Pax6 2 60 3.333 2.317
Pax6 a 11 60 18.333 4.995
a Pck1 11 75 14.667 4.085
Pck1 Kras2-rs2 2 75 2.667 1.860
Kras2-rs2 Kcnb1 5 86 5.814 2.523
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
09/30/2025
MGI 6.24 		The Jackson Laboratory