Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:12785 Li K, et al., cDNA cloning and chromosomal mapping of the mouse type VII collagen gene (Col7a1): evidence for rapid evolutionary divergence of the gene. Genomics. 1993 Jun;16(3):733-9
• ID
  MGI:42270

Genes

Gene	Assay Type	Description
Trf	reported elsewhere	Degen, et al., Genomics 13:1368-1369, 1992
Gnai2	reported elsewhere	Degen, et al., Genomics 13:1368-1369, 1992
Mst1	reported elsewhere	Degen, et al., Genomics 13:1368-1369, 1992
Col7a1	Southern analysis	mCOL7A1-1
Cck	reported elsewhere	Degen, et al., Genomics 13:1368-1369, 1992

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Trf	Gnai2	Mst1	Col7a1	Cck
68	b	b	b	b	b
63	s	s	s	s	s
4	s	b	b	b	b
1	b	s	s	s	s
2	s	s	b	b	b
6	b	b	s	s	s
3	s	s	s	b	b
0	b	b	b	s	s
7	s	s	s	s	b
7	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Trf	Gnai2	1	13
Gnai2	Mst1	0	29
Mst1	Col7a1	0	32
Col7a1	Cck	0	9

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Trf	Gnai2	6	175	3.429	1.376
Gnai2	Mst1	8	190	4.211	1.457
Mst1	Col7a1	3	193	1.554	0.890
Col7a1	Cck	14	170	8.235	2.108