Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  X
• Reference
  J:11583 Kay G, et al., Determination of a molecular map position for Hyp using a new interspecific backcross produced by in vitro fertilization. Genomics. 1991 Nov;11(3):651-7
• ID
  MGI:41913

Genes

Gene	Allele	Assay Type	Description
Otc		Southern analysis	pMOTC
Hprt1		Southern analysis	pSB1
Dmd		Southern analysis	pCA1
Eda		visible phenotype
Pgk1		Southern analysis	pMPGK
DXSmh43		Southern analysis	MDSX43
Phex	Phex^Hyp	visible phenotype
Cbx-rs1		Southern analysis	p3962
Amelx		Southern analysis	pGEM17-2

Notes

• Reference
  Authors use Amg for Amel.
• Experiment
  Data from two backcrosses were combined. Females were either Ta Hyp/+ + or + Hyp/+ +. All males were + Hyp/Y.F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <d> <d> <d> <d> <d> <d> <d> <d> <d>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (M. m. domesticus x M. spretus)F1-Eda Phex/+ +
• Male Parent
  <d> <d> <d> <d> <d> <d> <d> <d> <d>/Y
• Strain
  M. m. domesticus
• Allele 1
  d from M. m. domesticus
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Otc	Hprt1	43	195
Otc	Dmd	64	176
Otc	Eda	64	75
Otc	Pgk1	88	151
Otc	DXSmh43	117	121
Otc	Phex	56	63
Otc	Cbx-rs1	115	111
Otc	Amelx	119	117
Hprt1	Dmd	23	215
Hprt1	Eda	19	119
Hprt1	Pgk1	47	191
Hprt1	DXSmh43	78	160
Hprt1	Phex	41	78
Hprt1	Cbx-rs1	90	135
Hprt1	Amelx	102	132
Dmd	Eda	6	133
Dmd	Pgk1	28	211
Dmd	DXSmh43	67	171
Dmd	Phex	38	81
Dmd	Cbx-rs1	71	142
Dmd	Amelx	94	142
Eda	Pgk1	10	129
Eda	DXSmh43	33	105
Eda	Phex	38	81
Eda	Cbx-rs1	40	90
Eda	Amelx	51	84
Pgk1	DXSmh43	39	199
Pgk1	Phex	23	96
Pgk1	Cbx-rs1	51	175
Pgk1	Amelx	65	170
DXSmh43	Phex	3	116
DXSmh43	Cbx-rs1	14	211
DXSmh43	Amelx	26	208
Phex	Cbx-rs1	2	110
Phex	Amelx	5	111
Cbx-rs1	Amelx	11	211

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Otc	Hprt1	43	238	18.067	2.494
Otc	Dmd	64	240	26.667	2.854
Otc	Eda	64	139	46.043	4.228
Otc	Pgk1	88	239	36.820	3.120
Otc	DXSmh43	117	238	49.160	3.241
Otc	Phex	56	119	47.059	4.576
Otc	Cbx-rs1	115	226	50.885	3.325
Otc	Amelx	119	236	50.424	3.255
Hprt1	Dmd	23	238	9.664	1.915
Hprt1	Eda	19	138	13.768	2.933
Hprt1	Pgk1	47	238	19.748	2.580
Hprt1	DXSmh43	78	238	32.773	3.043
Hprt1	Phex	41	119	34.454	4.356
Hprt1	Cbx-rs1	90	225	40.000	3.266
Hprt1	Amelx	102	234	43.590	3.242
Dmd	Eda	6	139	4.317	1.724
Dmd	Pgk1	28	239	11.715	2.080
Dmd	DXSmh43	67	238	28.151	2.915
Dmd	Phex	38	119	31.933	4.274
Dmd	Cbx-rs1	71	213	33.333	3.230
Dmd	Amelx	94	236	39.831	3.187
Eda	Pgk1	10	139	7.194	2.192
Eda	DXSmh43	33	138	23.913	3.631
Eda	Phex	38	119	31.933	4.274
Eda	Cbx-rs1	40	130	30.769	4.048
Eda	Amelx	51	135	37.778	4.173
Pgk1	DXSmh43	39	238	16.387	2.399
Pgk1	Phex	23	119	19.328	3.620
Pgk1	Cbx-rs1	51	226	22.566	2.781
Pgk1	Amelx	65	235	27.660	2.918
DXSmh43	Phex	3	119	2.521	1.437
DXSmh43	Cbx-rs1	14	225	6.222	1.610
DXSmh43	Amelx	26	234	11.111	2.054
Phex	Cbx-rs1	2	112	1.786	1.251
Phex	Amelx	5	116	4.310	1.886
Cbx-rs1	Amelx	11	222	4.955	1.456