Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:3085 Yi T, et al., Assignment of a novel protein tyrosine phosphatase gene (Hcph) to mouse chromosome 6. Genomics. 1992 Nov;14(3):793-5
• ID
  MGI:41017

Genes

Gene	Assay Type	Description
Slc2a3	reported elsewhere	Hogan, Development 113:363, 1991
Tnfrsf1a	reported elsewhere	Goodwin, Mol Cell Biol 11:3020, 1991
Ptpn6	Southern analysis	MuHCP
Cd4	reported elsewhere
Fgf6	reported elsewhere

Notes

• Reference
  Revised gene symbol: Cd4 (formerly Ly-4). Hcp used for Hcph in this reference. Numbering of Tnfr gene changed to conform to human nomenclature.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Slc2a3	Tnfrsf1a	Ptpn6	Cd4	Fgf6
61	b	b	b	b	b
76	s	s	s	s	s
1	s	b	b	b	b
0	b	s	s	s	s
0	s	s	b	b	b
0	b	b	s	s	s
0	s	s	s	b	b
0	b	b	b	s	s
1	s	s	s	s	b
2	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Slc2a3	Tnfrsf1a	0	4
Tnfrsf1a	Ptpn6	0	34
Ptpn6	Cd4	0	47
Cd4	Fgf6	0	47

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Slc2a3	Tnfrsf1a	1	145	0.690	0.687
Tnfrsf1a	Ptpn6	0	175	0.000	0.000
Ptpn6	Cd4	0	188	0.000	0.000
Cd4	Fgf6	3	188	1.596	0.914