Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:11120 Siracusa LD, et al., Identification and applications of repetitive probes for gene mapping in the mouse. Genetics. 1991 Jan;127(1):169-79
• ID
  MGI:39842

Genes

Gene	Assay Type	Description
Ldlr	reported elsewhere	Kingsley, et al., Genetics 123:165-172, 1989
Odc-rs14	Southern analysis	pCR6
Tpi-rs4	Southern analysis	pHTPI-5A
Thy1	reported elsewhere	Kingsley, et al., Genetics 123:165-172, 1989

Notes

• Reference
  Revised gene symbols: Hc, Rarb and Csfmr (formerly C5, Hap and Fim-2), Mtv-40 and Mtv-41 (formerly Mtv-30 and Mtv-31), Odc-rs1, Odc-rs2, Odc-rs4, Odc-rs5, Odc-rs7, Odc-rs14, Odc-rs15 and Odc-rs13 (formerly Odc-1, Odc-2, Odc-4, Odc-5, Odc-7, Odc-14, Odc-15 and Odc-13). Msx1 (formerly Hox-7). Tpi, Tpi-rs2, Tpi-rs3, Tpi-rs4, Tpi-rs5, Tpi-rs6, Tpi-rs7, Tpi-rs8 and Tpi-rs9 (formerly Tpi-1, Tpi-2, Tpi-3, Tpi-4, Tpi-5, Tpi-6, Tpi-7, Tpi-8 and Tpi-9 respectively).
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Ldlr	Odc-rs14	1	171
Odc-rs14	Tpi-rs4	13	167
Tpi-rs4	Thy1	22	134

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Ldlr	Odc-rs14	1	172	0.581	0.580
Odc-rs14	Tpi-rs4	13	180	7.222	1.929
Tpi-rs4	Thy1	22	156	14.103	2.787