Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:11195 Seldin MF, et al., A proximal mouse chromosome 9 linkage map that further defines linkage groups homologous with segments of human chromosomes 11, 15, and 19. Genomics. 1991 Apr;9(4):678-85
• ID
  MGI:1858917

Genes

Gene	Assay Type	Description
Pvrl2-rs1	Southern analysis	pSP64-Bam-3G
Ldlr	Southern analysis	pLDLR3
Icam1	Southern analysis	Icam1 cDNA12
Thy1	Southern analysis	pTM8
Ncam1	Southern analysis	pEC501
Hexa	Southern analysis	pbHa-5
Gsta	Southern analysis	A24-1
Trf	Southern analysis	pmTf-5

Notes

• Experiment
  Author uses symbol A24 for Gsta probe.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Pvrl2-rs1	Ldlr	Icam1	Thy1	Ncam1	Hexa	Gsta	Trf
32	c	c	c	c	c	c	c	c
35	s	s	s	s	s	s	s	s
4	c	s	s	s	s	s	s	s
1	s	c	c	c	c	c	c	c
11	c	c	c	s	s	s	s	s
10	s	s	s	c	c	c	c	c
2	c	c	c	s	s	s	s	s
1	s	s	s	s	s	c	c	c
4	c	c	c	c	c	c	s	s
5	s	s	s	s	s	s	c	c
3	c	c	c	c	c	c	c	s
5	s	s	s	s	s	s	s	c
1	c	s	s	s	s	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Pvrl2-rs1	Ldlr	6	114	5.263	2.091
Ldlr	Icam1	0	114	0.000	0.000
Icam1	Thy1	23	114	20.175	3.759
Thy1	Ncam1	0	114	0.000	0.000
Ncam1	Hexa	1	114	0.877	0.873
Hexa	Gsta	9	114	7.895	2.526
Gsta	Trf	9	114	7.895	2.526