Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  3
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343300

Genes

Gene	Assay Type
D3Mit221	PCR amplified length variant
D3Mit62	PCR amplified length variant
Car2	PCR amplified length variant
D3Mit46	PCR amplified length variant
D3Mit21	PCR amplified length variant
D3Mit306	PCR amplified length variant
D3Mit6	PCR amplified length variant
D3Mit5	PCR amplified length variant
D3Mit208	PCR amplified length variant
D3Mit185	PCR amplified length variant
D3Mit241	PCR amplified length variant
D3Mit49	PCR amplified length variant
D3Mit187	PCR amplified length variant
D3Mit12	PCR amplified length variant
D3Mit189	PCR amplified length variant
D3Mit106	PCR amplified length variant
D3Mit347	PCR amplified length variant
D3Mit14	PCR amplified length variant
D3Mit17	PCR amplified length variant
D3Mit86	PCR amplified length variant
D3Mit147	PCR amplified length variant
D3Mit19	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D3Mit221	D	D	D	B	D	B	D	D	D	D	B	B	D	D	B	B	B	B	B	B	D	B	D	D	D	B	B	B	.	D	B	D	D	B	B	B
D3Mit62	D	D	D	B	D	B	D	D	D	D	B	B	D	D	B	B	B	B	B	B	D	B	D	D	D	B	B	B	.	D	D	D	D	B	B	D
Car2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B	.	D	D	D	D	B	B	D
D3Mit46	D	D	B	B	D	B	B	D	D	D	B	D	D	B	D	B	B	B	B	D	D	D	D	D	B	B	D	D	D	D	D	B	D	B	D	.
D3Mit21	D	D	B	B	D	B	D	D	D	D	D	B	D	D	B	D	B	B	B	B	D	D	B	D	D	B	D	D	B	D	D	D	B	D	B	D
D3Mit306	D	D	B	B	D	D	D	D	B	D	B	B	D	D	B	D	B	B	B	B	D	D	B	D	B	B	D	D	B	D	D	D	B	B	B	D
D3Mit6	B	D	B	B	D	D	D	D	B	D	B	B	D	D	B	D	B	B	B	B	D	D	B	D	B	B	D	D	.	D	D	D	B	B	B	D
D3Mit5	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	B	D	D	.	D	D	D	B	B	B	D
D3Mit208	B	B	B	B	D	D	D	D	B	B	D	B	B	B	B	D	D	B	B	D	D	D	B	D	B	B	D	D	D	D	D	D	D	B	B	D
D3Mit185	B	B	D	B	D	D	D	D	B	B	D	B	B	B	B	D	D	B	B	D	D	D	B	D	B	B	B	D	D	D	D	D	D	B	B	D
D3Mit241	B	B	D	B	B	D	D	D	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B	B	D	D	D	D	D	D	B	B	D
D3Mit49	B	B	D	B	B	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B	D	D	D	D	D	D	D	B	B	B
D3Mit187	B	B	D	B	B	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B	D	D	D	D	D	D	D	B	B	B
D3Mit12	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	B	D	D	D	D	D	D	D	B	D	B
D3Mit189	B	B	B	B	D	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B	D	D	D	D	D	D	D	B	D	B
D3Mit106	B	D	B	B	D	B	D	D	D	B	D	B	B	B	B	D	D	B	B	D	B	D	B	D	B	B	D	D	D	D	B	D	D	B	D	B
D3Mit347	B	D	B	B	D	B	D	D	D	B	D	B	B	B	D	D	D	B	B	D	B	D	B	B	B	D	D	D	B	D	B	D	D	B	D	B
D3Mit14	B	D	B	B	D	B	D	D	D	B	B	B	D	D	D	D	B	D	B	D	B	D	B	B	B	D	D	D	B	D	B	D	B	B	B	B
D3Mit17	B	D	B	B	D	D	D	D	D	B	B	B	D	D	D	D	B	B	B	D	B	D	B	B	B	D	D	D	B	D	B	D	B	B	.	D
D3Mit86	B	D	B	B	B	D	D	D	D	B	B	B	D	D	D	D	B	B	B	D	D	D	B	B	B	D	D	D	B	D	B	B	B	B	.	D
D3Mit147	B	D	B	B	B	D	D	D	D	B	B	B	D	D	D	B	B	B	B	D	D	D	B	B	B	D	D	D	B	D	B	B	B	B	.	D
D3Mit19	B	D	B	D	B	B	D	D	D	B	D	B	D	B	D	B	D	B	B	D	B	D	B	B	B	D	D	D	B	B	B	B	B	B	.	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D3Mit221	D3Mit62	2	35	1.562	1.173
D3Mit62	Car2	0	9	0.000	0.000
Car2	D3Mit46	4	8	50.000	70.711
D3Mit46	D3Mit21	14	35	25.000	12.939
D3Mit21	D3Mit306	5	36	4.386	2.299
D3Mit306	D3Mit6	1	35	0.746	0.768
D3Mit6	D3Mit5	0	13	0.000	0.000
D3Mit5	D3Mit208	1	13	2.174	2.361
D3Mit208	D3Mit185	2	36	1.515	1.136
D3Mit185	D3Mit241	2	36	1.515	1.136
D3Mit241	D3Mit49	4	36	3.333	1.886
D3Mit49	D3Mit187	0	36	0.000	0.000
D3Mit187	D3Mit12	1	14	2.000	2.159
D3Mit12	D3Mit189	0	14	0.000	0.000
D3Mit189	D3Mit106	4	36	3.333	1.886
D3Mit106	D3Mit347	4	36	3.333	1.886
D3Mit347	D3Mit14	7	36	6.863	3.287
D3Mit14	D3Mit17	3	35	2.459	1.558
D3Mit17	D3Mit86	3	35	2.459	1.558
D3Mit86	D3Mit147	1	35	0.746	0.768
D3Mit147	D3Mit19	7	35	7.143	3.450