Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  17
• Reference
  J:46282 Yoshino M, et al., BAC clones and STS markers near the distal breakpoint of the fourth t-inversion, In(17)4d, in the H2-M region on mouse chromosome 17. Mamm Genome. 1998 Mar;9(3):186-92
• ID
  MGI:1337382

Genes

Gene	Assay Type	Description
53T	overlapping clones, PCR amplified length variant
D17Leh89	overlapping clones, Southern analysis	Leh89pcr
D17Tu49e	overlapping clones, Southern analysis	Tu49pcr
51S	overlapping clones, PCR amplified length variant
D17Tu49d	overlapping clones, Southern analysis	Tu49pcr
268M14S	overlapping clones, PCR amplified length variant
D17Mit64	overlapping clones, PCR amplified length variant
91E7R	overlapping clones, PCR amplified length variant
12T	overlapping clones, PCR amplified length variant
51T	overlapping clones, PCR amplified length variant
20T	overlapping clones, PCR amplified length variant
D17Tu49a	overlapping clones, Southern analysis	Tu49pcr
121D10L	overlapping clones, PCR amplified length variant
20S	overlapping clones, PCR amplified length variant
D17Tu49c	overlapping clones, Southern analysis	Tu49pcr
3T	overlapping clones, PCR amplified length variant
D17Tu49b	overlapping clones, Southern analysis	Tu49pcr
3S	overlapping clones, PCR amplified length variant
16T	overlapping clones, PCR amplified length variant
48T	overlapping clones, PCR amplified length variant
29S	overlapping clones, PCR amplified length variant
45S	overlapping clones, PCR amplified length variant
11S	overlapping clones, PCR amplified length variant
D17Leh467	overlapping clones, Southern analysis	Leh467pcr
11T	overlapping clones, PCR amplified length variant
29T	overlapping clones, PCR amplified length variant
16S	overlapping clones, PCR amplified length variant
42S	overlapping clones, PCR amplified length variant
8S	overlapping clones, PCR amplified length variant
Pgk2	overlapping clones, Southern analysis	Pgk2 probe
Crisp3	overlapping clones, Southern analysis	Aeg2 probe
42T	overlapping clones, PCR amplified length variant
Crisp1	overlapping clones, Southern analysis	Aeg1 probe

Notes

• Experiment
  The authors used overlapping clones and PCR to build a physical map ordering class I genes on mouse Chromosome 17. The order of markers were: 53T - D17Leh89 - D17Tu49e - 51S - 53T - D17Tu49d - 268M14S - D17Mit64 - 91E7R - 12T - 51T - 12T - 20T - 51T - D17Tu49a - 121D10L - 20S - D17Tu49c - 53T - 3T - D17Tu49b - 51T - 3S - 16T - 48T - 29S - 45S - 11S - D17Leh467 - 11T - 29T - 16S - 42S - 8S - Pgk2 - Crisp3 - 42T - Crisp1. Primers for 53T and 51T amplified sequences are on at least two BAC clones.