Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  4
• Reference
  J:38473 Machleder D, et al., Complex genetic control of HDL levels in mice in response to an atherogenic diet. Coordinate regulation of HDL levels and bile acid metabolism. J Clin Invest. 1997 Mar 15;99(6):1406-19
• ID
  MGI:1330733

Genes

Gene	Assay Type	Description
Cyp7a1	Southern analysis	C7AH probe
D4Mit19
Coq3
D4Mit4
D4Ucla3
D4Mit17
D4Mit9
D4Ucla4
D4Ucla5
D4Mit14
D4Ucla1

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  UCLA (BSB)
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Cyp7a1	D4Mit19	4	62
D4Mit19	Coq3	5	55
Coq3	D4Mit4	2	55
D4Mit4	D4Ucla3	5	52
D4Ucla3	D4Mit17	5	51
D4Mit17	D4Mit9	5	56
D4Mit9	D4Ucla4	5	60
D4Ucla4	D4Ucla5	8	56
D4Ucla5	D4Mit14	18	48
D4Mit14	D4Ucla1	4	60

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Cyp7a1	D4Mit19	4	66	6.061	2.937
D4Mit19	Coq3	5	60	8.333	3.568
Coq3	D4Mit4	2	57	3.509	2.437
D4Mit4	D4Ucla3	5	57	8.772	3.747
D4Ucla3	D4Mit17	5	56	8.929	3.811
D4Mit17	D4Mit9	5	61	8.197	3.512
D4Mit9	D4Ucla4	5	65	7.692	3.305
D4Ucla4	D4Ucla5	8	64	12.500	4.134
D4Ucla5	D4Mit14	18	66	27.273	5.482
D4Mit14	D4Ucla1	4	64	6.250	3.026