Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  13
• Reference
  J:23895 Amadou C, et al., Localization of new genes and markers to the distal part of the human major histocompatibility complex (MHC) region and comparison with the mouse: new insights into the evolution of mammalian genomes. Genomics. 1995 Mar 1;26(1):9-20
• ID
  MGI:1270833

Genes

Gene	Assay Type	Description
Tcrg	reported elsewhere
Nid1	reported elsewhere
Trim27	Southern analysis	Rfp probe
Btn1a1	Southern analysis	Btn probe
Fim1	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Tcrg	Nid1	Trim27	Btn1a1	Fim1
51	b	b	b	b	b
51	s	s	s	s	s
0	s	b	b	b	b
0	b	s	s	s	s
0	s	s	b	b	b
0	b	b	s	s	s
0	s	s	s	b	b
1	b	b	b	s	s
2	s	s	s	s	b
0	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Tcrg	Nid1	0	13
Nid1	Trim27	2	80
Trim27	Btn1a1	0	61
Btn1a1	Fim1	0	50

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Tcrg	Nid1	0	118	0.000	0.000
Nid1	Trim27	2	187	1.070	0.752
Trim27	Btn1a1	1	166	0.602	0.601
Btn1a1	Fim1	2	155	1.290	0.906