Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  11
• Reference
  J:45416 Fujii TA, et al., Genomic structure and chromosomal localization of the murine LIM class homeobox gene Lhx1. Mamm Genome. 1998 Jan;9(1):81-3
• ID
  MGI:1197093

Genes

Gene	Assay Type	Description
Nf1	reported elsewhere
Ccl1	reported elsewhere
Lhx1	Southern analysis	Lhx1 genomic
Mpo	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Nf1	Ccl1	Lhx1	Mpo
62	b	b	b	b
60	s	s	s	s
1	s	b	b	b
3	b	s	s	s
0	s	s	b	b
1	b	b	s	s
1	s	s	s	b
0	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Nf1	Ccl1	2	37
Ccl1	Lhx1	0	61
Lhx1	Mpo	1	1

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Nf1	Ccl1	6	167	3.593	1.440
Ccl1	Lhx1	1	189	0.529	0.528
Lhx1	Mpo	2	130	1.538	1.079