Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  17
• Reference
  J:30437 Nishimura M, et al., The SMXA: a new set of recombinant inbred strain of mice consisting of 26 substrains and their genetic profile. Mamm Genome. 1995 Dec;6(12):850-7
• ID
  MGI:1195934

Genes

Gene	Assay Type
D17Mit29	reported elsewhere
D17Mit23	reported elsewhere
D17Mit28	reported elsewhere
H2-K1	reported elsewhere
D17Mit21	reported elsewhere
Neu1	reported elsewhere
Lta	reported elsewhere
H2-D1	reported elsewhere
D17Mit68	reported elsewhere
D17Mit93	reported elsewhere
D17Mit129	reported elsewhere
D17Mit1	reported elsewhere

RI

• Origin
  SM/J x A/J
• Designation
  SMXA
• Abbreviation 1
  A
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	3	4	5	6	7	8	9	10	11	12	14	15	16	17	18	19	20	21	21d	22	23	24	25	26	27	29	30
D17Mit29	S	A	A	A	A	S	S	S	A	A	A	A	S	A	A	S	S	.	A	.	A	A	A	S	S	S	S	S
D17Mit23	S	A	S	A	A	S	S	S	A	A	A	A	S	A	A	S	S	.	A	.	A	A	A	S	S	S	S	S
D17Mit28	A	A	S	A	A	S	S	S	A	A	S	A	S	A	A	S	S	.	A	.	A	A	A	A	S	S	S	A
H2-K1	A	A	S	A	A	S	S	S	A	A	S	A	S	A	A	S	S	.	A	.	A	A	A	A	S	S	S	A
D17Mit21	A	A	S	A	A	S	S	S	A	A	S	A	S	A	A	S	S	.	A	.	A	A	A	A	S	S	S	A
Neu1	A	A	S	A	A	S	S	S	A	A	A	A	S	A	S	S	S	.	A	.	A	A	A	A	S	S	S	A
Lta	A	A	S	A	A	A	S	S	A	A	A	A	S	A	S	S	S	.	A	.	A	A	A	A	S	S	S	A
H2-D1	A	A	S	A	A	S	S	S	A	A	A	A	S	A	S	S	S	.	A	.	A	A	A	A	S	S	S	A
D17Mit68	A	A	S	A	A	S	S	A	A	A	A	A	S	S	S	S	S	.	A	.	A	A	A	A	S	S	S	A
D17Mit93	A	S	S	A	A	A	S	A	A	A	S	S	S	A	A	S	A	.	A	.	A	A	A	S	A	A	A	S
D17Mit129	S	S	A	A	S	A	S	A	A	A	A	S	S	S	A	A	S	.	S	.	A	A	A	S	A	A	A	S
D17Mit1	S	S	A	A	S	A	S	A	S	A	A	S	S	S	A	A	S	.	S	.	A	A	A	S	A	A	A	S

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D17Mit29	D17Mit23	1	26	1.020	1.062
D17Mit23	D17Mit28	4	26	5.000	2.990
D17Mit28	H2-K1	0	26	0.000	0.000
H2-K1	D17Mit21	0	26	0.000	0.000
D17Mit21	Neu1	2	26	2.174	1.670
Neu1	Lta	1	26	1.020	1.062
Lta	H2-D1	1	26	1.020	1.062
H2-D1	D17Mit68	2	26	2.174	1.670
D17Mit68	D17Mit93	12	26	37.500	25.817
D17Mit93	D17Mit129	8	26	14.286	7.805
D17Mit129	D17Mit1	1	26	1.020	1.062