Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:42171 Gunther T, et al., The open brain (opb) mutation maps to mouse chromosome 1. Mamm Genome. 1997 Aug;8(8):583-5
• ID
  MGI:1096447

Genes

Gene	Assay Type
D1Mit3	PCR amplified length variant
D12Mit1001	PCR amplified length variant
D1Mit211	PCR amplified length variant
D1Mit410	PCR amplified length variant
Rab23	visible phenotype
D1Mit318	PCR amplified length variant
D1Mit374	PCR amplified length variant
D1Mit243	PCR amplified length variant
D1Mit278	PCR amplified length variant
D1Mit245	PCR amplified length variant
D1Mit123	PCR amplified length variant
D1Mit213	PCR amplified length variant

Notes

• Experiment
  Backcross opb homozygous mice were analyzed.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BL/6J-Rab23 x C3H)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J-Rab23
• Allele 1
  b from C57BL/6J-Rab23
• Allele 2
  c from C3H

CROSS Data

MC #mice	D1Mit3	D12Mit1001	D1Mit211	D1Mit410	Rab23	D1Mit318	D1Mit374	D1Mit243	D1Mit278	D1Mit245	D1Mit123	D1Mit213
131	b	b	b	b	b	b	b	b	b	b	b	b
6	c	b	b	b	b	b	b	b	b	b	b	b
1	c	c	c	b	b	b	b	b	b	b	b	b
9	b	b	b	b	b	b	b	b	b	c	c	c
1	b	b	b	b	b	b	b	b	b	b	c	c
8	b	b	b	b	b	b	b	b	b	b	b	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit3	D12Mit1001	6	156	3.846	1.540
D12Mit1001	D1Mit211	0	156	0.000	0.000
D1Mit211	D1Mit410	1	156	0.641	0.639
D1Mit410	Rab23	0	156	0.000	0.000
Rab23	D1Mit318	0	156	0.000	0.000
D1Mit318	D1Mit374	0	156	0.000	0.000
D1Mit374	D1Mit243	0	156	0.000	0.000
D1Mit243	D1Mit278	0	156	0.000	0.000
D1Mit278	D1Mit245	9	156	5.769	1.867
D1Mit245	D1Mit123	1	156	0.641	0.639
D1Mit123	D1Mit213	8	156	5.128	1.766