Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR1S1	HGNC:8227 (HGNC) 219959 (Entrez Gene) OR1S1 (Alliance of Genome Resources)	Chr11 q12.1	Chr11:58212720-58216084 (+) GRCh38		Q8NH92 (UniProt | EBI) NM_001004458 (RefSeq)
	OR1S2	HGNC:15141 (HGNC) 219958 (Entrez Gene) OR1S2 (Alliance of Genome Resources)	Chr11 q12.1	Chr11:58203204-58204142 (-) GRCh38		Q8NGQ3 (UniProt | EBI) NM_001004459 (RefSeq)
mouse	Or1s2	MGI:3031330 (MGI) 258991 (Entrez Gene) Gene Tree Or1s2 (Alliance of Genome Resources)	Chr19 8.87 cM	Chr19:13757912-13758978 (+) GRCm39		258991 (NCBI Gene Model) NP_667200 (RefSeq) NM_146989 (RefSeq)
rat	Or1s2	RGD:1333888 (Rat Genome Database) 293809 (Entrez Gene) Or1s2 (Alliance of Genome Resources)	Chr1 q43			NP_001000260 (RefSeq) NM_001000260 (RefSeq)
zebrafish	or80a1	ZDB-GENE-070806-55 (Zebrafish Model Organism Database) 100861459 (Entrez Gene) or80a1 (Alliance of Genome Resources)	Chr10			NP_001243282 (RefSeq) NM_001256353 (RefSeq)
	or80a8	ZDB-GENE-070806-56 (Zebrafish Model Organism Database) 100861457 (Entrez Gene) or80a8 (Alliance of Genome Resources)	Chr10			NP_001243281 (RefSeq) NM_001256352 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.