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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM35 HGNC:16285 (HGNC)
23087 (Entrez Gene)
617007 (OMIM)
TRIM35 (Alliance of Genome Resources)
Chr8 p21.2 Chr8:27284886-27311272 (-)
GRCh38
Q9UPQ4 (UniProt | EBI)
NM_171982 (RefSeq)
mouse Trim35 MGI:1914104 (MGI)
66854 (Entrez Gene)
Gene Tree
Trim35 (Alliance of Genome Resources)
Chr14 34.44 cM Chr14:66534480-66548873 (+)
GRCm39
ENSMUSG00000022043 (Ensembl Gene Model)
ENSMUSP00000022623 (Ensembl)
ENSMUST00000022623 (Ensembl)
rat Trim35 RGD:1564642 (Rat Genome Database)
498538 (Entrez Gene)
Trim35 (Alliance of Genome Resources)
Chr15 p12 Q5RKG6 (UniProt | EBI)
NM_001025142 (RefSeq)
zebrafish si:ch73-106l15.2 ZDB-GENE-131119-94 (Zebrafish Model Organism Database)
100333005 (Entrez Gene)
si:ch73-106l15.2 (Alliance of Genome Resources)
Chr3 XP_068074697 (RefSeq)
trim35-1 ZDB-GENE-050522-17 (Zebrafish Model Organism Database)
553197 (Entrez Gene)
trim35-1 (Alliance of Genome Resources)
Chr1 NP_001018156 (RefSeq)
NM_001018146 (RefSeq)
trim35-4 ZDB-GENE-110919-7 (Zebrafish Model Organism Database)
100006932 (Entrez Gene)
trim35-4 (Alliance of Genome Resources)
Chr3 XP_001345530 (RefSeq)
trim35-7 ZDB-GENE-050522-333 (Zebrafish Model Organism Database)
553726 (Entrez Gene)
trim35-7 (Alliance of Genome Resources)
Chr3 NP_001018533 (RefSeq)
NM_001020697 (RefSeq)
trim35-9 ZDB-GENE-091112-11 (Zebrafish Model Organism Database)
541547 (Entrez Gene)
trim35-9 (Alliance of Genome Resources)
Chr3 NP_001410633 (RefSeq)
NM_001423704 (RefSeq)
trim35-10 ZDB-GENE-091113-36 (Zebrafish Model Organism Database)
799678 (Entrez Gene)
trim35-10 (Alliance of Genome Resources)
Chr3 XP_001921639 (RefSeq)
trim35-12 ZDB-GENE-110920-4 (Zebrafish Model Organism Database)
566593 (Entrez Gene)
trim35-12 (Alliance of Genome Resources)
Chr3
trim35-13 ZDB-GENE-110920-5 (Zebrafish Model Organism Database)
566281 (Entrez Gene)
trim35-13 (Alliance of Genome Resources)
Chr3 XP_068075540 (RefSeq)
trim35-14 ZDB-GENE-110920-6 (Zebrafish Model Organism Database)
100006191 (Entrez Gene)
trim35-14 (Alliance of Genome Resources)
Chr4 XP_001345023 (RefSeq)
trim35-19 ZDB-GENE-070424-178 (Zebrafish Model Organism Database)
562814 (Entrez Gene)
trim35-19 (Alliance of Genome Resources)
Chr3 NP_001082868 (RefSeq)
NM_001089399 (RefSeq)
trim35-24 ZDB-GENE-060421-8366 (Zebrafish Model Organism Database)
557392 (Entrez Gene)
trim35-24 (Alliance of Genome Resources)
Chr3 NP_001038176 (RefSeq)
NM_001044711 (RefSeq)
trim35-25 ZDB-GENE-060503-484 (Zebrafish Model Organism Database)
561511 (Entrez Gene)
trim35-25 (Alliance of Genome Resources)
Chr3 XP_690007 (RefSeq)
trim35-28 ZDB-GENE-071004-19 (Zebrafish Model Organism Database)
559351 (Entrez Gene)
trim35-28 (Alliance of Genome Resources)
Chr16 NP_001103174 (RefSeq)
NM_001109704 (RefSeq)
trim35-29 ZDB-GENE-041114-35 (Zebrafish Model Organism Database)
492475 (Entrez Gene)
trim35-29 (Alliance of Genome Resources)
Chr16 NP_001007348 (RefSeq)
NM_001007347 (RefSeq)
trim35-31 ZDB-GENE-061009-3 (Zebrafish Model Organism Database)
560122 (Entrez Gene)
trim35-31 (Alliance of Genome Resources)
Chr3 NP_001103855 (RefSeq)
NM_001110385 (RefSeq)
trim35-39 ZDB-GENE-080219-13 (Zebrafish Model Organism Database)
557841 (Entrez Gene)
trim35-39 (Alliance of Genome Resources)
Chr23 NP_001107055 (RefSeq)
NM_001113583 (RefSeq)
trim35-44 ZDB-GENE-110407-9 (Zebrafish Model Organism Database)
100002639 (Entrez Gene)
trim35-44 (Alliance of Genome Resources)
Chr22 XP_001342383 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory