Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRAMEF4	HGNC:31971 (HGNC) 400735 (Entrez Gene) PRAMEF4 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12879212-12886201 (-) GRCh38		O60810 (UniProt | EBI) NM_001009611 (RefSeq)
	PRAMEF15	HGNC:26764 (HGNC) 653619 (Entrez Gene) PRAMEF15 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13315581-13322598 (+) GRCh38		P0DUQ1 (UniProt | EBI) NM_001098376 (RefSeq)
	PRAMEF20	HGNC:25224 (HGNC) 645425 (Entrez Gene) PRAMEF20 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13410450-13421328 (+) GRCh38		Q5VT98 (UniProt | EBI) NM_001099852 (RefSeq)
mouse	Pramel34	MGI:2141341 (MGI) 381654 (Entrez Gene) Gene Tree Pramel34 (Alliance of Genome Resources)	Chr5 47.29 cM	Chr5:93783041-93819368 (-) GRCm39		381654 (NCBI Gene Model) NP_001157756 (RefSeq) NM_001164284 (RefSeq)
rat	Pramel34l	RGD:1565129 (Rat Genome Database) 503459 (Entrez Gene) Pramel34l (Alliance of Genome Resources)	ChrX q31			XP_017457709 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.