Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	H2-T24	MGI:95958 (MGI) 15042 (Entrez Gene) Gene Tree H2-T24 (Alliance of Genome Resources)	Chr17 18.84 cM	Chr17:36316587-36331452 (-) GRCm39		ENSMUSG00000053835 (Ensembl Gene Model) ENSMUSP00000109389 (Ensembl) ENSMUST00000113760 (Ensembl)
rat	RT1-T24-1	RGD:1359499 (Rat Genome Database) 361787 (Entrez Gene) RT1-T24-1 (Alliance of Genome Resources)	Chr20 p12			NP_001397193 (RefSeq) NM_001008858 (RefSeq)
	RT1-T24-3	RGD:1624211 (Rat Genome Database) 414788 (Entrez Gene) RT1-T24-3 (Alliance of Genome Resources)	Chr20			NP_001159875 (RefSeq) NM_001166403 (RefSeq)
	RT1-T24-4	RGD:1598233 (Rat Genome Database) 414784 (Entrez Gene) RT1-T24-4 (Alliance of Genome Resources)	Chr20 p12			NP_001008826 (RefSeq) NM_001008826 (RefSeq)
zebrafish	mhc1ula	ZDB-GENE-130814-1 (Zebrafish Model Organism Database) 796419 (Entrez Gene) mhc1ula (Alliance of Genome Resources)	Chr22			NP_001304679 (RefSeq) NM_001317750 (RefSeq)
	mhc1uma	ZDB-GENE-140820-1 (Zebrafish Model Organism Database) 101883648 (Entrez Gene) mhc1uma (Alliance of Genome Resources)	Chr22			NP_001373772 (RefSeq) NM_001386843 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.