Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM65	HGNC:27316 (HGNC) 201292 (Entrez Gene) 619408 (OMIM) TRIM65 (Alliance of Genome Resources)	Chr17 q25.1	Chr17:75879537-75896951 (-) GRCh38		Q6PJ69 (UniProt | EBI) NM_173547 (RefSeq)
mouse	Trim65	MGI:2442815 (MGI) 338364 (Entrez Gene) Gene Tree Trim65 (Alliance of Genome Resources)	Chr11 80.91 cM	Chr11:116012672-116021954 (-) GRCm39		ENSMUSG00000054517 (Ensembl Gene Model) ENSMUSP00000063410 (Ensembl) ENSMUST00000067632 (Ensembl)
rat	Trim65	RGD:1559497 (Rat Genome Database) 303684 (Entrez Gene) Trim65 (Alliance of Genome Resources)	Chr10 q32.1			NP_001129186 (RefSeq) NM_001135714 (RefSeq)
zebrafish	btr06	ZDB-GENE-080516-2 (Zebrafish Model Organism Database) 100151764 (Entrez Gene) btr06 (Alliance of Genome Resources)	Chr7			NP_001120951 (RefSeq) NM_001127479 (RefSeq)
	btr09	ZDB-GENE-080722-46 (Zebrafish Model Organism Database) 100170790 (Entrez Gene) btr09 (Alliance of Genome Resources)	Chr7			NP_001124100 (RefSeq) NM_001130628 (RefSeq)
	btr12	ZDB-GENE-060929-548 (Zebrafish Model Organism Database) 767681 (Entrez Gene) btr12 (Alliance of Genome Resources)	Chr7			NP_001070087 (RefSeq) NM_001076619 (RefSeq)
	btr16	ZDB-GENE-060929-1066 (Zebrafish Model Organism Database) 767728 (Entrez Gene) btr16 (Alliance of Genome Resources)	Chr15			NP_001070134 (RefSeq) NM_001076666 (RefSeq)
	btr22	ZDB-GENE-080402-4 (Zebrafish Model Organism Database) 100144555 (Entrez Gene) btr22 (Alliance of Genome Resources)	Chr19			NP_001410830 (RefSeq) NM_001423901 (RefSeq)
	btr23	ZDB-GENE-070705-375 (Zebrafish Model Organism Database) 100334710 (Entrez Gene) btr23 (Alliance of Genome Resources)	Chr19			XP_009292260 (RefSeq)
	btr25	ZDB-GENE-070705-377 (Zebrafish Model Organism Database) 571141 (Entrez Gene) btr25 (Alliance of Genome Resources)	Chr19			NP_001093511 (RefSeq) NM_001100041 (RefSeq)
	btr26	ZDB-GENE-070705-378 (Zebrafish Model Organism Database) 100149795 (Entrez Gene) btr26 (Alliance of Genome Resources)	Chr19			XP_005173810 (RefSeq)
	btr29	ZDB-GENE-090512-2 (Zebrafish Model Organism Database) 797384 (Entrez Gene) btr29 (Alliance of Genome Resources)	Chr19			NP_001159606 (RefSeq) NM_001166134 (RefSeq)
	btr30	ZDB-GENE-040426-1407 (Zebrafish Model Organism Database) 393394 (Entrez Gene) btr30 (Alliance of Genome Resources)	Chr19			NP_956716 (RefSeq) NM_200422 (RefSeq)
	btr33	ZDB-GENE-090512-4 (Zebrafish Model Organism Database) 799840 (Entrez Gene) btr33 (Alliance of Genome Resources)	Chr24			XP_017209516 (RefSeq)
	si:ch211-247l8.10	ZDB-GENE-131122-78 (Zebrafish Model Organism Database) 101885574 (Entrez Gene) si:ch211-247l8.10 (Alliance of Genome Resources)	Chr15			XP_068069804 (RefSeq)
	si:dkey-46i9.6	ZDB-GENE-160114-63 (Zebrafish Model Organism Database) 571944 (Entrez Gene) si:dkey-46i9.6 (Alliance of Genome Resources)	Chr7			XP_700683 (RefSeq)
	trim65	ZDB-GENE-130613-1 (Zebrafish Model Organism Database) 100149099 (Entrez Gene) trim65 (Alliance of Genome Resources)	Chr12			XP_001920401 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.