Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM58	HGNC:24150 (HGNC) 25893 (Entrez Gene) 620527 (OMIM) TRIM58 (Alliance of Genome Resources)	Chr1 q44	Chr1:247857187-247880138 (+) GRCh38		Q8NG06 (UniProt | EBI) NM_015431 (RefSeq)
mouse	Trim58	MGI:2684862 (MGI) 216781 (Entrez Gene) Gene Tree Trim58 (Alliance of Genome Resources)	Chr11 36.23 cM	Chr11:58531291-58543230 (+) GRCm39		ENSMUSG00000037124 (Ensembl Gene Model) ENSMUSP00000074594 (Ensembl) ENSMUST00000075084 (Ensembl)
rat	Trim58	RGD:1566174 (Rat Genome Database) 303167 (Entrez Gene) Trim58 (Alliance of Genome Resources)	Chr10 q22			NP_001178570 (RefSeq) NM_001191641 (RefSeq)
zebrafish	trim69	ZDB-GENE-030131-857 (Zebrafish Model Organism Database) 101883816 (Entrez Gene) trim69 (Alliance of Genome Resources)	Chr10			NP_001289175 (RefSeq) NM_001302246 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.