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Vertebrate Homology
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Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAV13-1 HGNC:12108 (HGNC)
28671 (Entrez Gene)
TRAV13-1 (Alliance of Genome Resources)
Chr14 q11.2 Chr14:21868839-21869365 (+)
GRCh38
A0A0B4J241 (UniProt | EBI)
TRAV13-2 HGNC:12109 (HGNC)
28670 (Entrez Gene)
TRAV13-2 (Alliance of Genome Resources)
Chr14 q11.2 Chr14:21918188-21918756 (+)
GRCh38
A0A0B4J235 (UniProt | EBI)
mouse Trav5-1 MGI:3815062 (MGI)
633740 (Entrez Gene)
Gene Tree
Trav5-1 (Alliance of Genome Resources)
Chr14 27.02 cM Chr14:52860023-52860539 (+)
GRCm39
633740 (NCBI Gene Model)
A0A075B5Z7 (UniProt | EBI)
zebrafish nitr1b ZDB-GENE-020225-16 (Zebrafish Model Organism Database)
170995 (Entrez Gene)
nitr1b (Alliance of Genome Resources)
Chr7 NP_001296748 (RefSeq)
NM_001309819 (RefSeq)
nitr1c ZDB-GENE-001106-4 (Zebrafish Model Organism Database)
60645 (Entrez Gene)
nitr1c (Alliance of Genome Resources)
Chr7 NP_938164 (RefSeq)
NM_198350 (RefSeq)
nitr1d ZDB-GENE-020225-11 (Zebrafish Model Organism Database)
170990 (Entrez Gene)
nitr1d (Alliance of Genome Resources)
Chr7 NP_938163 (RefSeq)
NM_198349 (RefSeq)
nitr1h ZDB-GENE-041001-84 (Zebrafish Model Organism Database)
368781 (Entrez Gene)
nitr1h (Alliance of Genome Resources)
Chr7 XP_068078576 (RefSeq)
NM_001011884 (RefSeq)
nitr1k ZDB-GENE-001106-5 (Zebrafish Model Organism Database)
60646 (Entrez Gene)
nitr1k (Alliance of Genome Resources)
Chr7 XP_068078532 (RefSeq)
NM_198348 (RefSeq)
nitr1l ZDB-GENE-020225-7 (Zebrafish Model Organism Database)
170986 (Entrez Gene)
nitr1l (Alliance of Genome Resources)
Chr7 NP_938161 (RefSeq)
NM_198347 (RefSeq)
nitr1m ZDB-GENE-020225-5 (Zebrafish Model Organism Database)
170971 (Entrez Gene)
nitr1m (Alliance of Genome Resources)
Chr7 NP_001296747 (RefSeq)
NM_198341 (RefSeq)
nitr1n ZDB-GENE-020225-4 (Zebrafish Model Organism Database)
170970 (Entrez Gene)
nitr1n (Alliance of Genome Resources)
Chr7 NP_001032660 (RefSeq)
NM_001037571 (RefSeq)
nitr2a ZDB-GENE-020225-28 (Zebrafish Model Organism Database)
795524 (Entrez Gene)
nitr2a (Alliance of Genome Resources)
Chr7 NP_001122263 (RefSeq)
NM_001128791 (RefSeq)
nitr2b ZDB-GENE-001106-6 (Zebrafish Model Organism Database)
60647 (Entrez Gene)
nitr2b (Alliance of Genome Resources)
Chr7 NP_571724 (RefSeq)
NM_131649 (RefSeq)
nitr3a ZDB-GENE-001106-8 (Zebrafish Model Organism Database)
60649 (Entrez Gene)
nitr3a (Alliance of Genome Resources)
Chr7 NP_571727 (RefSeq)
NM_131652 (RefSeq)
nitr4a ZDB-GENE-001106-11 (Zebrafish Model Organism Database)
60652 (Entrez Gene)
nitr4a (Alliance of Genome Resources)
Chr7 NP_938158 (RefSeq)
NM_131656 (RefSeq)
nitr5 ZDB-GENE-020225-40 (Zebrafish Model Organism Database)
100216319 (Entrez Gene)
nitr5 (Alliance of Genome Resources)
Chr7 NP_001135740 (RefSeq)
NM_001142268 (RefSeq)
nitr6a ZDB-GENE-020225-42 (Zebrafish Model Organism Database)
170984 (Entrez Gene)
nitr6a (Alliance of Genome Resources)
Chr7 NP_954581 (RefSeq)
NM_199130 (RefSeq)
nitr8 ZDB-GENE-041001-7 (Zebrafish Model Organism Database)
449534 (Entrez Gene)
nitr8 (Alliance of Genome Resources)
Chr7 NP_001005577 (RefSeq)
NM_001030121 (RefSeq)
nitr12 ZDB-GENE-041001-1 (Zebrafish Model Organism Database)
557932 (Entrez Gene)
nitr12 (Alliance of Genome Resources)
Chr7 NP_001020667 (RefSeq)
NM_001025496 (RefSeq)
nitr14a ZDB-GENE-070108-3 (Zebrafish Model Organism Database)
100170774 (Entrez Gene)
nitr14a (Alliance of Genome Resources)
Chr14 NP_001124085 (RefSeq)
NM_001130613 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory