Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Zfp985	MGI:3651986 (MGI) 433804 (Entrez Gene) Gene Tree Zfp985 (Alliance of Genome Resources)	Chr4 78.51 cM	Chr4:147637734-147669655 (+) GRCm39		ENSMUSG00000065999 (Ensembl Gene Model) ENSMUSP00000080438 (Ensembl) ENSMUST00000081742 (Ensembl)
rat	Rex2	RGD:1586256 (Rat Genome Database) 691254 (Entrez Gene) Rex2 (Alliance of Genome Resources)	Chr5 q36			XP_038967274 (RefSeq)
	Rex2l4	RGD:7623967 (Rat Genome Database) 102551014 (Entrez Gene) Rex2l4 (Alliance of Genome Resources)	Chr5			XP_038967266 (RefSeq)
	Zfp34	RGD:2319680 (Rat Genome Database) 100361693 (Entrez Gene) Zfp34 (Alliance of Genome Resources)	Chr5			XP_063144712 (RefSeq)
zebrafish	si:dkey-4c15.13	ZDB-GENE-030131-2023 (Zebrafish Model Organism Database) 110438252 (Entrez Gene) si:dkey-4c15.13 (Alliance of Genome Resources)	Chr22			NP_001410153 (RefSeq) NM_001423224 (RefSeq)
	zgc:173693	ZDB-GENE-080722-17 (Zebrafish Model Organism Database) 100170822 (Entrez Gene) zgc:173693 (Alliance of Genome Resources)	Chr22			NP_001124129 (RefSeq) NM_001130657 (RefSeq)
	znf1001	ZDB-GENE-080213-7 (Zebrafish Model Organism Database) 798047 (Entrez Gene) znf1001 (Alliance of Genome Resources)	Chr3			NP_001104697 (RefSeq) NM_001111227 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.