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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Or1o1 MGI:2177490 (MGI)
258504 (Entrez Gene)
Gene Tree
Or1o1 (Alliance of Genome Resources)
Chr17 19.16 cM Chr17:37716368-37717400 (+)
GRCm39
258504 (NCBI Gene Model)
NP_666722 (RefSeq)
NM_146511 (RefSeq)
rat Or1o2c RGD:1334000 (Rat Genome Database)
406016 (Entrez Gene)
Or1o2c (Alliance of Genome Resources)
Chr20 p12 NP_001001117 (RefSeq)
NM_001001117 (RefSeq)
Or1o11b RGD:1332651 (Rat Genome Database)
405204 (Entrez Gene)
Or1o11b (Alliance of Genome Resources)
Chr20 p12 NP_001000896 (RefSeq)
NM_001000896 (RefSeq)
Or1o11c RGD:1334019 (Rat Genome Database)
294183 (Entrez Gene)
Or1o11c (Alliance of Genome Resources)
Chr20 p12 NP_001000277 (RefSeq)
NM_001000277 (RefSeq)
zebrafish or41a1 ZDB-GENE-070806-65 (Zebrafish Model Organism Database)
100150395 (Entrez Gene)
or41a1 (Alliance of Genome Resources)
Chr10 NP_001121879 (RefSeq)
NM_001128407 (RefSeq)
or64a1 ZDB-GENE-070806-105 (Zebrafish Model Organism Database)
100150287 (Entrez Gene)
or64a1 (Alliance of Genome Resources)
Chr15 NP_001121876 (RefSeq)
NM_001128404 (RefSeq)
or80a4 ZDB-GENE-070806-57 (Zebrafish Model Organism Database)
100861456 (Entrez Gene)
or80a4 (Alliance of Genome Resources)
Chr10 NP_001243280 (RefSeq)
NM_001256351 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory