Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR52N5	HGNC:15231 (HGNC) 390075 (Entrez Gene) OR52N5 (Alliance of Genome Resources)	Chr11 p15.4	Chr11:5776165-5783355 (-) GRCh38		Q8NH56 (UniProt | EBI) NM_001385662 (RefSeq)
mouse	Or52n5	MGI:3030503 (MGI) 259045 (Entrez Gene) Gene Tree Or52n5 (Alliance of Genome Resources)	Chr7 55.7 cM	Chr7:104587735-104588688 (+) GRCm39		259045 (NCBI Gene Model) NP_667254 (RefSeq) NM_147043 (RefSeq)
rat	Or52n5-ps1	RGD:1333554 (Rat Genome Database) 405419 (Entrez Gene) Or52n5-ps1 (Alliance of Genome Resources)	Chr1
zebrafish	or30by3	ZDB-GENE-010308-3 (Zebrafish Model Organism Database) 554780 (Entrez Gene) or30by3 (Alliance of Genome Resources)	Chr15			NP_001034713 (RefSeq) NM_001039624 (RefSeq)
	or41a1	ZDB-GENE-070806-65 (Zebrafish Model Organism Database) 100150395 (Entrez Gene) or41a1 (Alliance of Genome Resources)	Chr10			NP_001121879 (RefSeq) NM_001128407 (RefSeq)
	or80a7	ZDB-GENE-070806-60 (Zebrafish Model Organism Database) 100861451 (Entrez Gene) or80a7 (Alliance of Genome Resources)	Chr10			NP_001243274 (RefSeq) NM_001256345 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.