Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM29	HGNC:17274 (HGNC) 23650 (Entrez Gene) 610658 (OMIM) TRIM29 (Alliance of Genome Resources)	Chr11 q23.3	Chr11:120111286-120185529 (-) GRCh38		Q14134 (UniProt | EBI) NM_001330382 (RefSeq)
mouse	Trim29	MGI:1919419 (MGI) 72169 (Entrez Gene) Gene Tree Trim29 (Alliance of Genome Resources)	Chr9 24.28 cM	Chr9:43222145-43247412 (+) GRCm39		ENSMUSG00000032013 (Ensembl Gene Model) ENSMUSP00000034511 (Ensembl) ENSMUST00000034511 (Ensembl)
rat	Trim29	RGD:1307858 (Rat Genome Database) 300656 (Entrez Gene) Trim29 (Alliance of Genome Resources)	Chr8 q22			NP_001100285 (RefSeq) NM_001106815 (RefSeq)
zebrafish	btr01	ZDB-GENE-090511-2 (Zebrafish Model Organism Database) 563047 (Entrez Gene) btr01 (Alliance of Genome Resources)	Chr1			XP_691507 (RefSeq)
	btr09	ZDB-GENE-080722-46 (Zebrafish Model Organism Database) 100170790 (Entrez Gene) btr09 (Alliance of Genome Resources)	Chr7			NP_001124100 (RefSeq) NM_001130628 (RefSeq)
	btr12	ZDB-GENE-060929-548 (Zebrafish Model Organism Database) 767681 (Entrez Gene) btr12 (Alliance of Genome Resources)	Chr7			NP_001070087 (RefSeq) NM_001076619 (RefSeq)
	btr30	ZDB-GENE-040426-1407 (Zebrafish Model Organism Database) 393394 (Entrez Gene) btr30 (Alliance of Genome Resources)	Chr19			NP_956716 (RefSeq) NM_200422 (RefSeq)
	btr33	ZDB-GENE-090512-4 (Zebrafish Model Organism Database) 799840 (Entrez Gene) btr33 (Alliance of Genome Resources)	Chr24			XP_017209516 (RefSeq)
	ftr86	ZDB-GENE-060929-108 (Zebrafish Model Organism Database) 767638 (Entrez Gene) ftr86 (Alliance of Genome Resources)	Chr15			NP_001070047 (RefSeq) NM_001076579 (RefSeq)
	ftr91	ZDB-GENE-131125-31 (Zebrafish Model Organism Database) 558375 (Entrez Gene) ftr91 (Alliance of Genome Resources)	Chr15			XP_686669 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.