Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Gm28171	MGI:5578877 (MGI) 102636748 (Entrez Gene) Gene Tree Gm28171 (Alliance of Genome Resources)	ChrY Syntenic	ChrY:5793395-5795728 (+) GRCm39		ENSMUSG00000100634 (Ensembl Gene Model) ENSMUSP00000140005 (Ensembl) ENSMUST00000190100 (Ensembl)
rat	LOC100910078	RGD:6500561 (Rat Genome Database) 100910078 (Entrez Gene) LOC100910078 (Alliance of Genome Resources)	Chr11
	LOC103694730	RGD:9357395 (Rat Genome Database) 103694730 (Entrez Gene) LOC103694730 (Alliance of Genome Resources)	ChrY			XP_063136681 (RefSeq)
	LOC108353098	RGD:11387844 (Rat Genome Database) 108353098 (Entrez Gene) LOC108353098 (Alliance of Genome Resources)	Chr3			XP_063136753 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.