Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HAPSTR1	HGNC:30103 (HGNC) 29035 (Entrez Gene) HAPSTR1 (Alliance of Genome Resources)	Chr16 p13.2	Chr16:9091644-9121635 (+) GRCh38		Q14CZ0 (UniProt | EBI) NM_014117 (RefSeq)
mouse	Hapstr1	MGI:1916303 (MGI) 69053 (Entrez Gene) Gene Tree Hapstr1 (Alliance of Genome Resources)	Chr16 4.37 cM	Chr16:8647964-8676786 (+) GRCm39		ENSMUSG00000022507 (Ensembl Gene Model) ENSMUSP00000023150 (Ensembl) ENSMUST00000023150 (Ensembl)
rat	Hapstr1	RGD:1309748 (Rat Genome Database) 302913 (Entrez Gene) Hapstr1 (Alliance of Genome Resources)	Chr10 q12			NP_001100442 (RefSeq) NM_001106972 (RefSeq)
zebrafish	hapstr1a	ZDB-GENE-030131-5510 (Zebrafish Model Organism Database) 327299 (Entrez Gene) hapstr1a (Alliance of Genome Resources)	Chr3			NP_001315095 (RefSeq) NM_001328166 (RefSeq)
	hapstr1b	ZDB-GENE-030131-1107 (Zebrafish Model Organism Database) 322387 (Entrez Gene) hapstr1b (Alliance of Genome Resources)	Chr1			A2BE76 (UniProt | EBI) NM_199602 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.