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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC52A3 HGNC:16187 (HGNC)
113278 (Entrez Gene)
613350 (OMIM)
SLC52A3 (Alliance of Genome Resources)
Chr20 p13 Chr20:760080-780033 (-)
GRCh38
Brown-Vialetto-Van Laere syndrome 1
Fazio-Londe disease
Q9NQ40 (UniProt | EBI)
NM_001370085 (RefSeq)
mouse Slc52a3 MGI:1916948 (MGI)
69698 (Entrez Gene)
Gene Tree
Slc52a3 (Alliance of Genome Resources)
Chr2 74.83 cM Chr2:151838431-151851178 (+)
GRCm39
69698 (NCBI Gene Model)
Q9D6X5 (UniProt | EBI)
NM_027172 (RefSeq)
rat Slc52a3 RGD:1304644 (Rat Genome Database)
311536 (Entrez Gene)
Slc52a3 (Alliance of Genome Resources)
Chr3 q41 Q4FZU9 (UniProt | EBI)
NM_001037198 (RefSeq)
zebrafish slc52a3-1 ZDB-GENE-060421-4490 (Zebrafish Model Organism Database)
678609 (Entrez Gene)
slc52a3-1 (Alliance of Genome Resources)
Chr8 B0S5Y3 (UniProt | EBI)
NM_001040357 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory