Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR52E6	HGNC:15215 (HGNC) 390078 (Entrez Gene) OR52E6 (Alliance of Genome Resources)	Chr11 p15.4	Chr11:5840928-5841952 (-) GRCh38		Q96RD3 (UniProt | EBI) NM_001005167 (RefSeq)
	OR52E8	HGNC:15217 (HGNC) 390079 (Entrez Gene) OR52E8 (Alliance of Genome Resources)	Chr11 p15.4	Chr11:5856749-5857690 (-) GRCh38		Q6IFG1 (UniProt | EBI) NM_001005168 (RefSeq)
mouse	Or52e8b	MGI:3030509 (MGI) 258147 (Entrez Gene) Gene Tree Or52e8b (Alliance of Genome Resources)	Chr7 55.73 cM	Chr7:104673232-104674173 (-) GRCm39		258147 (NCBI Gene Model) NP_001011848 (RefSeq) NM_001011848 (RefSeq)
rat	Or52e8	RGD:1334364 (Rat Genome Database) 293327 (Entrez Gene) Or52e8 (Alliance of Genome Resources)	Chr1 q32			NP_001000180 (RefSeq) NM_001000180 (RefSeq)
	Or52e8b	RGD:1333955 (Rat Genome Database) 293329 (Entrez Gene) Or52e8b (Alliance of Genome Resources)	Chr1 q32			NP_001000182 (RefSeq) NM_001000182 (RefSeq)
zebrafish	or55e1	ZDB-GENE-990415-195 (Zebrafish Model Organism Database) 797584 (Entrez Gene) or55e1 (Alliance of Genome Resources)	Chr15			XP_003200052 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.