Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	EFCC1	HGNC:25692 (HGNC) 79825 (Entrez Gene) EFCC1 (Alliance of Genome Resources)	Chr3 q21.3	Chr3:129001304-129040742 (+) GRCh38		Q9HA90 (UniProt | EBI) NM_001377501 (RefSeq)
mouse	Efcc1	MGI:3611451 (MGI) 58229 (Entrez Gene) Gene Tree Efcc1 (Alliance of Genome Resources)	Chr6 39.02 cM	Chr6:87707851-87732890 (+) GRCm39		ENSMUSG00000068263 (Ensembl Gene Model) ENSMUSP00000032132 (Ensembl) ENSMUST00000032132 (Ensembl)
rat	Efcc1	RGD:1596494 (Rat Genome Database) 685202 (Entrez Gene) Efcc1 (Alliance of Genome Resources)	Chr4 q34			NP_001157393 (RefSeq) NM_001163921 (RefSeq)
zebrafish	efcc1	ZDB-GENE-120813-3 (Zebrafish Model Organism Database) 100333996 (Entrez Gene) efcc1 (Alliance of Genome Resources)	Chr11			XP_002663835 (RefSeq)
	si:ch211-112f3.4	ZDB-GENE-141219-9 (Zebrafish Model Organism Database) 793893 (Entrez Gene) si:ch211-112f3.4 (Alliance of Genome Resources)	Chr11			XP_021335565 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.