Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	OR1R1P	HGNC:8226 (HGNC) 9596 (Entrez Gene) OR1R1P (Alliance of Genome Resources)	Chr17 p13.3	Chr17:3385930-3386874 (+) GRCh38		NP_001382985 (RefSeq) NM_001396056 (RefSeq)
mouse	Or1r1	MGI:3030232 (MGI) 258705 (Entrez Gene) Gene Tree Or1r1 (Alliance of Genome Resources)	Chr11 45.69 cM	Chr11:73874488-73875432 (-) GRCm39		258705 (NCBI Gene Model) NP_666921 (RefSeq) NM_146710 (RefSeq)
rat	Or1r1	RGD:1333058 (Rat Genome Database) 287508 (Entrez Gene) Or1r1 (Alliance of Genome Resources)	Chr10 q24			NP_001000033 (RefSeq) NM_001000033 (RefSeq)
zebrafish	or6at1	ZDB-GENE-990415-190 (Zebrafish Model Organism Database) 30356 (Entrez Gene) or6at1 (Alliance of Genome Resources)	Chr21			XP_009293935 (RefSeq)
	or42a9	ZDB-GENE-070806-75 (Zebrafish Model Organism Database) 100148707 (Entrez Gene) or42a9 (Alliance of Genome Resources)	Chr10			XP_021329892 (RefSeq)
	or42b2	ZDB-GENE-990415-193 (Zebrafish Model Organism Database) 30358 (Entrez Gene) or42b2 (Alliance of Genome Resources)	Chr10			NP_571206 (RefSeq) NM_131131 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.