Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	POMT2	HGNC:19743 (HGNC) 29954 (Entrez Gene) 607439 (OMIM) POMT2 (Alliance of Genome Resources)	Chr14 q24.3	Chr14:77274956-77320883 (-) GRCh38	autosomal recessive limb-girdle muscular dystrophy autosomal recessive limb-girdle muscular dystrophy type 2N congenital muscular dystrophy-dystroglycanopathy type A2 lissencephaly muscular dystrophy muscular dystrophy-dystroglycanopathy type B2 Walker-Warburg syndrome	Q9UKY4 (UniProt | EBI) NM_013382 (RefSeq)
mouse	Pomt2	MGI:2444430 (MGI) 217734 (Entrez Gene) Gene Tree Pomt2 (Alliance of Genome Resources)	Chr12 41.3 cM	Chr12:87153635-87194742 (-) GRCm39		217734 (NCBI Gene Model) Q8BGQ4 (UniProt | EBI) NM_153415 (RefSeq)
rat	Pomt2	RGD:1586427 (Rat Genome Database) 688673 (Entrez Gene) Pomt2 (Alliance of Genome Resources)	Chr6 q31			NP_001040579 (RefSeq) NM_001047114 (RefSeq)
zebrafish	pomt2	ZDB-GENE-070112-1002 (Zebrafish Model Organism Database) 563878 (Entrez Gene) pomt2 (Alliance of Genome Resources)	Chr17			F1Q8R9 (UniProt | EBI) NM_001045033 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.