Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Ifi47	MGI:99448 (MGI) 15953 (Entrez Gene) Gene Tree Ifi47 (Alliance of Genome Resources)	Chr11 29.08 cM	Chr11:48967414-48987801 (+) GRCm39		ENSMUSG00000078920 (Ensembl Gene Model) ENSMUSP00000104825 (Ensembl) ENSMUST00000109202 (Ensembl)
rat	Ifi47	RGD:708470 (Rat Genome Database) 246208 (Entrez Gene) Ifi47 (Alliance of Genome Resources)	Chr10 q21			NP_742016 (RefSeq) NM_172019 (RefSeq)
zebrafish	irgf1	ZDB-GENE-051212-5 (Zebrafish Model Organism Database) 100137101 (Entrez Gene) irgf1 (Alliance of Genome Resources)	Chr19			NP_001307352 (RefSeq) NM_001320423 (RefSeq)
	irgf3	ZDB-GENE-051212-6 (Zebrafish Model Organism Database) 797731 (Entrez Gene) irgf3 (Alliance of Genome Resources)	Chr19			XP_001338197 (RefSeq)
	si:ch73-171o20.1	ZDB-GENE-140106-80 (Zebrafish Model Organism Database) 563833 (Entrez Gene) si:ch73-171o20.1 (Alliance of Genome Resources)	Chr19			XP_017207834 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.