Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PEDS1	HGNC:16735 (HGNC) 387521 (Entrez Gene) 610994 (OMIM) PEDS1 (Alliance of Genome Resources)	Chr20 q13.13	Chr20:50118254-50153734 (-) GRCh38		A5PLL7 (UniProt | EBI) NM_199129 (RefSeq)
	PEDS1-UBE2V1	HGNC:33521 (HGNC) 387522 (Entrez Gene) PEDS1-UBE2V1 (Alliance of Genome Resources)	Chr20 q13.13	Chr20:50081124-50153723 (-) GRCh38		NP_954673 (RefSeq) NM_003349 (RefSeq)
mouse	Peds1	MGI:2142624 (MGI) 407243 (Entrez Gene) Gene Tree Peds1 (Alliance of Genome Resources)	Chr2 87.5 cM	Chr2:167485145-167503464 (-) GRCm39		407243 (NCBI Gene Model) Q99LQ7 (UniProt | EBI) NM_145538 (RefSeq)
rat	Peds1	RGD:1309093 (Rat Genome Database) 362278 (Entrez Gene) Peds1 (Alliance of Genome Resources)	Chr3 q42			NP_001107224 (RefSeq) NM_001113752 (RefSeq)
zebrafish	peds1	ZDB-GENE-041010-150 (Zebrafish Model Organism Database) 450031 (Entrez Gene) peds1 (Alliance of Genome Resources)	Chr8			NP_001006052 (RefSeq) NM_001006052 (RefSeq)
	si:ch211-212o1.2	ZDB-GENE-041111-310 (Zebrafish Model Organism Database) 492735 (Entrez Gene) si:ch211-212o1.2 (Alliance of Genome Resources)	Chr18			NP_001073633 (RefSeq) NM_001080164 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.