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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCL2 HGNC:10618 (HGNC)
6347 (Entrez Gene)
158105 (OMIM)
CCL2 (Alliance of Genome Resources)
Chr17 q12 Chr17:34255274-34257208 (+)
GRCh38
aggressive periodontitis
anterior uveitis
asthma
Behcet's disease
bipolar disorder
end stage renal disease
familial hyperlipidemia
Henoch-Schoenlein purpura
hepatocellular carcinoma
ischemia
lupus nephritis
multiple sclerosis
myocardial infarction
oral squamous cell carcinoma
pancreatitis
proliferative diabetic retinopathy
pulmonary tuberculosis
skin melanoma
systemic lupus erythematosus
temporal arteritis
thrombocytopenia
P13500 (UniProt | EBI)
NM_002982 (RefSeq)
CCL13 HGNC:10611 (HGNC)
6357 (Entrez Gene)
601391 (OMIM)
CCL13 (Alliance of Genome Resources)
Chr17 q12 Chr17:34356480-34358610 (+)
GRCh38
multiple sclerosis
Q99616 (UniProt | EBI)
NM_005408 (RefSeq)
mouse Ccl2 MGI:98259 (MGI)
20296 (Entrez Gene)
Gene Tree
Ccl2 (Alliance of Genome Resources)
Chr11 49.82 cM Chr11:81926403-81928278 (+)
GRCm39
age related macular degeneration
20296 (NCBI Gene Model)
P10148 (UniProt | EBI)
NM_011333 (RefSeq)
rat Ccl2 RGD:3645 (Rat Genome Database)
24770 (Entrez Gene)
Ccl2 (Alliance of Genome Resources)
Chr10 q26 P14844 (UniProt | EBI)
NM_031530 (RefSeq)
zebrafish ccl38.6 ZDB-GENE-041014-165 (Zebrafish Model Organism Database)
100034523 (Entrez Gene)
ccl38.6 (Alliance of Genome Resources)
Chr20 NP_001076549 (RefSeq)
NM_001083080 (RefSeq)
ccl38a.3 ZDB-GENE-110411-218 (Zebrafish Model Organism Database)
100536999 (Entrez Gene)
ccl38a.3 (Alliance of Genome Resources)
Chr20 NP_001373315 (RefSeq)
NM_001386386 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory