Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGHV3-16	HGNC:5583 (HGNC) 28447 (Entrez Gene) IGHV3-16 (Alliance of Genome Resources)	Chr14 q32.33	Chr14:106165203-106165730 (-) GRCh38		A0A0C4DH30 (UniProt | EBI)
	IGHV3OR16-9	HGNC:5644 (HGNC) 28307 (Entrez Gene) IGHV3OR16-9 (Alliance of Genome Resources)	Chr16 p11.2	Chr16:32066065-32066358 (+) GRCh38
	IGHV3OR16-12	HGNC:5636 (HGNC) 28304 (Entrez Gene) IGHV3OR16-12 (Alliance of Genome Resources)	Chr16 p11.2	Chr16:33802764-33803217 (+) GRCh38
	IGHV3OR16-17	HGNC:55105 (HGNC) 390714 (Entrez Gene) IGHV3OR16-17 (Alliance of Genome Resources)	Chr16 p11.2	Chr16:33844758-33845308 (-) GRCh38
mouse	Ighv5-16	MGI:4439556 (MGI) 633568 (Entrez Gene) Gene Tree Ighv5-16 (Alliance of Genome Resources)	Chr12 62.21 cM	Chr12:113802148-113802441 (-) GRCm39		633568 (NCBI Gene Model) A0A0B4J1P4 (UniProt | EBI)
zebrafish	ighv11-2	ZDB-GENE-040514-37 (Zebrafish Model Organism Database) 554312 (Entrez Gene) ighv11-2 (Alliance of Genome Resources)	Chr3
	ighv14-1	ZDB-GENE-040514-42 (Zebrafish Model Organism Database) 777701 (Entrez Gene) ighv14-1 (Alliance of Genome Resources)	Chr3

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.