Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGHV3OR15-7	HGNC:5633 (HGNC) 28318 (Entrez Gene) IGHV3OR15-7 (Alliance of Genome Resources)	Chr15 q11.1	Chr15:19987656-19988117 (-) GRCh38
mouse	Ighv7-2	MGI:4439623 (MGI) 780800 (Entrez Gene) Gene Tree Ighv7-2 (Alliance of Genome Resources)	Chr12 62.23 cM	Chr12:113875645-113876103 (-) GRCm39		780800 (NCBI Gene Model) A0A0A6YX91 (UniProt | EBI)
zebrafish	ighv6-1	ZDB-GENE-040514-23 (Zebrafish Model Organism Database) 777698 (Entrez Gene) ighv6-1 (Alliance of Genome Resources)	Chr3
	ighv6-2	ZDB-GENE-040514-24 (Zebrafish Model Organism Database) 100535789 (Entrez Gene) ighv6-2 (Alliance of Genome Resources)	Chr3
	ighv9-1	ZDB-GENE-040514-30 (Zebrafish Model Organism Database) 554310 (Entrez Gene) ighv9-1 (Alliance of Genome Resources)	Chr3
	ighv10-1	ZDB-GENE-040514-34 (Zebrafish Model Organism Database) 619194 (Entrez Gene) ighv10-1 (Alliance of Genome Resources)	Chr3
	ighv11-1	ZDB-GENE-040514-36 (Zebrafish Model Organism Database) 777700 (Entrez Gene) ighv11-1 (Alliance of Genome Resources)	Chr3
	ighv11-2	ZDB-GENE-040514-37 (Zebrafish Model Organism Database) 554312 (Entrez Gene) ighv11-2 (Alliance of Genome Resources)	Chr3

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.