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Vertebrate Homology
Source
 Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human IGHV4-4 HGNC:5652 (HGNC)
28401 (Entrez Gene)
IGHV4-4 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106011922-106012420 (-)
GRCh38 		A0A075B6R2 (UniProt | EBI)
IGHV4-28 HGNC:5645 (HGNC)
28400 (Entrez Gene)
IGHV4-28 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106324254-106324760 (-)
GRCh38 		A0A0C4DH34 (UniProt | EBI)
IGHV4-30-2 HGNC:5647 (HGNC)
28398 (Entrez Gene)
IGHV4-30-2 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106349283-106349720 (-)
GRCh38
IGHV4-30-4 HGNC:5648 (HGNC)
28397 (Entrez Gene)
IGHV4-30-4 (Alliance of Genome Resources)
 Chr14 q32.33 P0DP06 (UniProt | EBI)
IGHV4-31 HGNC:5649 (HGNC)
28396 (Entrez Gene)
IGHV4-31 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106349283-106349792 (-)
GRCh38 		P0DP07 (UniProt | EBI)
IGHV4-34 HGNC:5650 (HGNC)
28395 (Entrez Gene)
IGHV4-34 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106373661-106374145 (-)
GRCh38 		P06331 (UniProt | EBI)
IGHV4-38-2 HGNC:5657 (HGNC)
28389 (Entrez Gene)
IGHV4-38-2 (Alliance of Genome Resources)
 Chr14 q32.33 P0DP08 (UniProt | EBI)
IGHV4-39 HGNC:5651 (HGNC)
28394 (Entrez Gene)
IGHV4-39 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106421709-106422218 (-)
GRCh38 		P01824 (UniProt | EBI)
IGHV4-59 HGNC:5654 (HGNC)
28392 (Entrez Gene)
IGHV4-59 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106627249-106627825 (-)
GRCh38 		P01825 (UniProt | EBI)
IGHV4-61 HGNC:5655 (HGNC)
28391 (Entrez Gene)
IGHV4-61 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106639119-106639657 (-)
GRCh38 		A0A0C4DH41 (UniProt | EBI)
IGHV4OR15-8 HGNC:5658 (HGNC)
28317 (Entrez Gene)
IGHV4OR15-8 (Alliance of Genome Resources)
 Chr15 q11.2 Chr15:22184967-22185402 (-)
GRCh38
mouse Ighv3-5 MGI:3648045 (MGI)
633457 (Entrez Gene)
Gene Tree
Ighv3-5 (Alliance of Genome Resources)
 Chr12 62.33 cM Chr12:114226272-114226570 (-)
GRCm39 		633457 (NCBI Gene Model)
P18533 (UniProt | EBI)
M61218 (GenBank | ENA | DDBJ)
zebrafish ighv5-2 ZDB-GENE-040514-16 (Zebrafish Model Organism Database)
777697 (Entrez Gene)
ighv5-2 (Alliance of Genome Resources)
 Chr3
ighv5-4 ZDB-GENE-040514-18 (Zebrafish Model Organism Database)
554307 (Entrez Gene)
ighv5-4 (Alliance of Genome Resources)
 Chr3
ighv5-5 ZDB-GENE-040514-19 (Zebrafish Model Organism Database)
554308 (Entrez Gene)
ighv5-5 (Alliance of Genome Resources)
 Chr3
ighv5-8 ZDB-GENE-040514-22 (Zebrafish Model Organism Database)
777761 (Entrez Gene)
ighv5-8 (Alliance of Genome Resources)
 Chr3
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory