Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HPD	HGNC:5147 (HGNC) 3242 (Entrez Gene) 609695 (OMIM) HPD (Alliance of Genome Resources)	Chr12 q24.31	Chr12:121839527-121888611 (-) GRCh38	hawkinsinuria tyrosinemia type III	P32754 (UniProt | EBI) NM_002150 (RefSeq)
mouse	Hpd	MGI:96213 (MGI) 15445 (Entrez Gene) Gene Tree Hpd (Alliance of Genome Resources)	Chr5 62.82 cM	Chr5:123309870-123320786 (-) GRCm39	tyrosinemia type III	15445 (NCBI Gene Model) P49429 (UniProt | EBI) NM_008277 (RefSeq)
rat	Hpd	RGD:61974 (Rat Genome Database) 29531 (Entrez Gene) Hpd (Alliance of Genome Resources)	Chr12 q16			P32755 (UniProt | EBI) NM_017233 (RefSeq)
zebrafish	hpda	ZDB-GENE-040426-986 (Zebrafish Model Organism Database) 394142 (Entrez Gene) hpda (Alliance of Genome Resources)	Chr5			Q6TGZ5 (UniProt | EBI) NM_201167 (RefSeq)
	hpdb	ZDB-GENE-040808-62 (Zebrafish Model Organism Database) 445287 (Entrez Gene) hpdb (Alliance of Genome Resources)	Chr8			NP_001003742 (RefSeq) NM_001003742 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.