Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	NUP54	HGNC:17359 (HGNC) 53371 (Entrez Gene) 607607 (OMIM) NUP54 (Alliance of Genome Resources)	Chr4 q21.1	Chr4:76107562-76148485 (-) GRCh38	dystonia	Q7Z3B4 (UniProt | EBI) NM_001278603 (RefSeq)
mouse	Nup54	MGI:1920460 (MGI) 269113 (Entrez Gene) Gene Tree Nup54 (Alliance of Genome Resources)	Chr5 46.75 cM	Chr5:92563399-92583078 (-) GRCm39		ENSMUSG00000034826 (Ensembl Gene Model) ENSMUSP00000046540 (Ensembl) ENSMUST00000038514 (Ensembl)
rat	Nup54	RGD:619926 (Rat Genome Database) 53372 (Entrez Gene) Nup54 (Alliance of Genome Resources)	Chr14 p22			P70582 (UniProt | EBI) NM_017361 (RefSeq)
zebrafish	nup54	ZDB-GENE-040426-2263 (Zebrafish Model Organism Database) 335750 (Entrez Gene) nup54 (Alliance of Genome Resources)	Chr21			NP_001001948 (RefSeq) NM_001001948 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.