Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAB42	HGNC:28702 (HGNC) 115273 (Entrez Gene) RAB42 (Alliance of Genome Resources)	Chr1 p35.3	Chr1:28592200-28596666 (+) GRCh38		Q8N4Z0 (UniProt | EBI) NM_001385188 (RefSeq)
mouse	Rab42	MGI:2441753 (MGI) 242681 (Entrez Gene) Gene Tree Rab42 (Alliance of Genome Resources)	Chr4 65.14 cM	Chr4:132029508-132030696 (-) GRCm39		ENSMUSG00000089687 (Ensembl Gene Model) ENSMUSP00000047735 (Ensembl) ENSMUST00000040411 (Ensembl)
rat	Rab42	RGD:1593983 (Rat Genome Database) 682865 (Entrez Gene) Rab42 (Alliance of Genome Resources)	Chr5			NP_001386744 (RefSeq) NM_001399815 (RefSeq)
zebrafish	rab42a	ZDB-GENE-040426-1983 (Zebrafish Model Organism Database) 406315 (Entrez Gene) rab42a (Alliance of Genome Resources)	Chr19			NP_998207 (RefSeq) NM_213042 (RefSeq)
	rab42b	ZDB-GENE-050417-172 (Zebrafish Model Organism Database) 550378 (Entrez Gene) rab42b (Alliance of Genome Resources)	Chr16			NP_001017683 (RefSeq) NM_001017683 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.