Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PDZK1	HGNC:8821 (HGNC) 5174 (Entrez Gene) 603831 (OMIM) PDZK1 (Alliance of Genome Resources)	Chr1 q21.1	Chr1:145670852-145708148 (-) GRCh38		Q5T2W1 (UniProt | EBI) NM_001201325 (RefSeq)
	PDZK1P1	HGNC:31974 (HGNC) 100034743 (Entrez Gene) PDZK1P1 (Alliance of Genome Resources)	Chr	Chr1:147993862-148014956 (-) GRCh38		A8MUH7 (UniProt | EBI)
mouse	Pdzk1	MGI:1928901 (MGI) 59020 (Entrez Gene) Gene Tree Pdzk1 (Alliance of Genome Resources)	Chr3 42.0 cM	Chr3:96736772-96778242 (+) GRCm39		59020 (NCBI Gene Model) Q9JIL4 (UniProt | EBI) NM_001355710 (RefSeq)
rat	Pdzk1	RGD:70924 (Rat Genome Database) 65144 (Entrez Gene) Pdzk1 (Alliance of Genome Resources)	Chr2 q34			Q9JJ40 (UniProt | EBI) NM_031712 (RefSeq)
zebrafish	pdzk1	ZDB-GENE-031222-1 (Zebrafish Model Organism Database) 337325 (Entrez Gene) pdzk1 (Alliance of Genome Resources)	Chr9			NP_001122142 (RefSeq) NM_001128670 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.